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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3183916_3184172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3183916 - 3184172

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCAAAATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTCAAAATT

Flanking Amino Acid:

DKDAKDILVKLFVREPERRL

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

67.8

0.4

63.8

41.4

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

60.1

0.39

1.9

84.17

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013668

3182797 - 3238728

55932

ENSAPLT00000027340

3182797 - 3222953

40157