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Intron Name: Anas_platyrhynchos_platyrhynchos_1_31840545_31843677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31840545 - 31843677

Intron Length:

3133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTCCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTTAC

U12 Branch Point Sequence:

CTTGCTGGAACA

Flanking Amino Acid:

TAIFGYLTFYDNVQSDLLHK

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

61.4

0.28

33.7

Major PPT

76.9

0.6

0.8

73.1

31.8

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

47.1

-0.2

2.2

63.35

43.5

Associated Gene:

Gene:

SLC38A1

Ensembl Gene ID:

ENSAPLG00000010056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010499

31838667 - 31872462

33796