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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3189027_3191198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3189027 - 3191198

Intron Length:

2172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TACTTTTTATTT

Flanking Amino Acid:

QFLHSKGIIYSSNELVPHDK

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.9

0.34

54.9

44.7

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

58.6

0.35

1.5

71.82

40.2

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157