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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3191262_3193600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3191262 - 3193600

Intron Length:

2339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGATGT

5'SS Class:

major

3'SS Sequence:

TTCTGTCACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

ACTGTCCTAACT

Flanking Amino Acid:

NCHKFDLPRATFYAAEIICG

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.3

72.5

39.9

Major BPS

0.55

71.8

31.4

Major PPT

75.2

0.57

0.9

73.6

36.1

Minor 5ss

-1

3.1

55.7

42.1

Minor BPS

57.3

0.31

1.8

74.35

42.6

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157

ENSAPLT00000013668

3182797 - 3238728

55932