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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3193693_3203020_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3193693 - 3203020

Intron Length:

9328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CTTGTCTTATTC

Flanking Amino Acid:

THVFCTFQTKENLFFVMEYL

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

81.1

0.7

0.8

73.8

36.5

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

55.1

0.14

1.7

64.92

41.8

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157

ENSAPLT00000013668

3182797 - 3238728

55932