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Intron Name: Anas_platyrhynchos_platyrhynchos_1_32020226_32021187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32020226 - 32021187

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTCAA

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

AGGCACTCAACT

Flanking Amino Acid:

AGLFGYLTFYGEVEDELLHT

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

66.8

40.3

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

87.2

0.84

0.6

84.1

23.8

Minor 5ss

32.3

-2

3.1

42.7

Minor BPS

49.9

0.08

1.8

66.7

43.1

Associated Gene:

Gene:

SLC38A4

Ensembl Gene ID:

ENSAPLG00000008807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038159

32014972 - 32034820

19849

ENSAPLT00000009191

32015174 - 32034907

19734