Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_32023482_32023576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32023482 - 32023576

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATT

Flanking Amino Acid:

RAFMKLEENSGEWYLNGNYL

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

78.8

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.8

0.83

0.7

84.7

Minor 5ss

36.6

-1.5

2.6

39.1

38.9

Minor BPS

78.1

0.96

86.75

33.6

Associated Gene:

Gene:

SLC38A4

Ensembl Gene ID:

ENSAPLG00000008807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038159

32014972 - 32034820

19849

ENSAPLT00000009191

32015174 - 32034907

19734