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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3203195_3205631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3203195 - 3205631

Intron Length:

2437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTTTCTGAGCA

Flanking Amino Acid:

KMLGKGSFGKVFLAELKSTD

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

73.8

0.59

1.3

72.8

Major PPT

74.2

0.55

0.9

66.8

39.3

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

59.6

0.3

1.7

71.77

40.4

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157

ENSAPLT00000013668

3182797 - 3238728

55932