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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3205811_3207648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3205811 - 3207648

Intron Length:

1838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTTCC

5'SS Class:

major

3'SS Sequence:

ATGTGTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTATTTGAATG

Flanking Amino Acid:

AIPTSTTGKKEPQGISWEIP

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

68.6

37.3

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

72.7

0.51

65.7

44.8

Minor 5ss

40.1

-1.1

53.8

43.5

Minor BPS

57.5

0.1

1.5

64.28

38.1

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157

ENSAPLT00000013668

3182797 - 3238728

55932