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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3211722_3211888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3211722 - 3211888

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATGAATG

Flanking Amino Acid:

GLNKQGYQCRQCNAAIHKKC

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

87.9

29.3

Major BPS

100

1.24

0.5

100

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

47.5

-0.2

2.8

66.5

37.9

Minor BPS

0.3

1.8

73.82

38.3

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157

ENSAPLT00000013668

3182797 - 3238728

55932