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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3211921_3212415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3211921 - 3212415

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAATGAA

5'SS Class:

major

3'SS Sequence:

CTGTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AAATTCAGAATT

Flanking Amino Acid:

TFCSVCHEFVWGLNKQGYQC

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

72.7

31.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.6

0.75

0.8

81.4

34.9

Minor 5ss

31.5

-2.1

3.2

36.7

42.9

Minor BPS

49.2

0.02

1.7

66.46

37.6

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027340

3182797 - 3222953

40157

ENSAPLT00000013668

3182797 - 3238728

55932