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Intron Name: Anas_platyrhynchos_platyrhynchos_1_321638_322214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

321638 - 322214

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGGCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CCAGATCTAACA

Flanking Amino Acid:

VHLPAGPAAQLRPLFLLALA

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

70.4

0.46

0.9

60.8

40.3

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

43.7

-0.4

1.9

49.22

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031590

320496 - 324861

4366