Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_32224643_32261599_F

Intron Information:

Intron Rank:

144377

Intron Class:

major

Intron Phase:

Intron Coordinates:

32224643 - 32261599

Intron Length:

36957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTATTTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTATCTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.7

0.67

0.8

36.5

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

50.1

0.08

1.8

73.52

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047908

32224046 - 32261934

37889