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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3223206_3238522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3223206 - 3238522

Intron Length:

15317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CATTTTATAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTCTCTTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

70.9

39.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.56

70.5

38.5

Minor 5ss

31.8

-2.1

2.6

37.6

39.7

Minor BPS

65.6

0.57

1.7

84.73

36.1

Associated Gene:

Gene:

PRKCQ

Ensembl Gene ID:

ENSAPLG00000013073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013668

3182797 - 3238728

55932