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Intron Name: Anas_platyrhynchos_platyrhynchos_1_323660_324046_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

323660 - 324046

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

GCCCCGCGCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

GCTGACACCACT

Flanking Amino Acid:

IRRSQDLCYQLLYRRVKLWS

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

55.5

0.12

45.2

36.5

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

37.9

-0.8

2.2

54.85

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046296

320455 - 324861

4407