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Intron Name: Anas_platyrhynchos_platyrhynchos_1_32387897_32388571_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32387897 - 32388571

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTCCCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CCTTTCTTAATT

Flanking Amino Acid:

CPEKLYLYLKQIEPSFYPKL

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

64.8

0.33

1.1

64.6

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

76.9

0.92

1.2

82.74

39.5

Associated Gene:

Gene:

RPAP3

Ensembl Gene ID:

ENSAPLG00000008565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008959

32384899 - 32403051

18153