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Intron Name: Anas_platyrhynchos_platyrhynchos_1_32396409_32396774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32396409 - 32396774

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCAT

5'SS Class:

strong_major

3'SS Sequence:

GATCTTCTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTTTTCTGATCT

Flanking Amino Acid:

ALKNLQGAKEDYEKVLELDA

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

38.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

71.2

0.48

0.9

65.3

35.9

Minor 5ss

-2.4

3.2

46.1

Minor BPS

62.2

0.46

1.7

81.47

39.8

Associated Gene:

Gene:

RPAP3

Ensembl Gene ID:

ENSAPLG00000008565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008959

32384899 - 32403051

18153