Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_3244292_3244965_F

Intron Information:

Intron Rank:

131940

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3244292 - 3244965

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGCCT

5'SS Class:

major

3'SS Sequence:

GCACCATCACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTCAA

U12 Branch Point Sequence:

CTTCACTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

58.1

46.4

Major BPS

65.6

0.39

0.9

67.3

29.6

Major PPT

57.6

0.17

48.2

39.2

Minor 5ss

31.9

-2.1

3.5

39.9

45.6

Minor BPS

56.1

0.27

1.8

74.92

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023219

3243175 - 3245012

1838