Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_33041860_33042290_F

Intron Information:

Intron Rank:

139294

Intron Class:

major

Intron Phase:

Intron Coordinates:

33041860 - 33042290

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

AAATCCAAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

72.7

0.51

65.7

44.8

Minor 5ss

-1.6

47.1

42.6

Minor BPS

47.3

-0.3

1.9

53.05

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025822

33041612 - 33048763

7152

ENSAPLT00000019057

33036773 - 33044287

7515