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Intron Name: Anas_platyrhynchos_platyrhynchos_1_33042487_33047993_F

Intron Information:

Intron Rank:

139297

Intron Class:

major

Intron Phase:

Intron Coordinates:

33042487 - 33047993

Intron Length:

5507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TACTCCCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AATATTTTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

74.4

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

72.6

0.51

0.9

65.9

34.7

Minor 5ss

32.2

-2

40.3

45.3

Minor BPS

49.4

-0

1.5

57.76

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025822

33041612 - 33048763

7152