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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3331328_3336917_F

Intron Information:

Intron Rank:

149464

Intron Class:

major

Intron Phase:

Intron Coordinates:

3331328 - 3336917

Intron Length:

5590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATTAC

U12 Branch Point Sequence:

ATTACCAGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

57.1

0.18

1.3

51.8

43.6

Major PPT

70.6

0.46

0.8

64.9

30.8

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

49.2

-0

1.9

66.68

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020189

3328955 - 3337967

9013