Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_334225_334668_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

334225 - 334668

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TCCTTGTGAACG

Flanking Amino Acid:

DKTLIKRLLKGIQRKRPSEV

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

79.7

0.67

0.9

37.4

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

47.2

-0.3

2.2

55.07

46.3

Associated Gene:

Gene:

DENND6B

Ensembl Gene ID:

ENSAPLG00000009711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010142

328733 - 348761

20029