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Intron Name: Anas_platyrhynchos_platyrhynchos_1_335456_335888_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
335456 - 335888

Intron Length:
433

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGACAT

5'SS Class:
strong_major

3'SS Sequence:
TGTCCTTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAT

U12 Branch Point Sequence:
AGAACCTGAACT

Flanking Amino Acid:
ILRVGELRMSGDLPKQVKVK

Intron Amino Acid Position:
347

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
73.4
37.3

Major BPS
90.7
1.01
0.7
90
19.9

Major PPT
78
0.63
0.8
72.3
32.4

Minor 5ss
39.7
-1.2
3.1
56
48.1

Minor BPS
63.3
0.49
1.5
74.72
40.9

Associated Gene:

Gene:
DENND6B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

328733 - 348761
20029