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Intron Name: Anas_platyrhynchos_platyrhynchos_1_33603364_33606980_R

Intron Information:

Intron Rank:

154739

Intron Class:

major

Intron Phase:

Intron Coordinates:

33603364 - 33606980

Intron Length:

3617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TACTGTATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

74.5

0.61

79.6

29.1

Major PPT

80.9

0.7

0.8

80.4

31.6

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

-0.1

2.1

67.1

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028442

33603099 - 33676625

73527