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Intron Name: Anas_platyrhynchos_platyrhynchos_1_336182_336606_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
336182 - 336606

Intron Length:
425

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGCTC

5'SS Class:
major

3'SS Sequence:
TCTGTTGTTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTGTAT

U12 Branch Point Sequence:
TGTATGGCAACT

Flanking Amino Acid:
VSSEMVMALTSCLAPLRYCC

Intron Amino Acid Position:
283

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
69.7
40.9

Major BPS
71.5
0.53
1.4
71.7
44.6

Major PPT
81.6
0.71
0.9
75.5
38.3

Minor 5ss
35.4
-1.7
3.4
50.6
45.9

Minor BPS
40.5
-0.6
2.6
65.2
45.1

Associated Gene:

Gene:
DENND6B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

328733 - 348761
20029