Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_338383_338932_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

338383 - 338932

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

TCAGTGCCAACT

Flanking Amino Acid:

FDKLEPCLEAVCNEIDQWPP

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

51.1

0.03

1.6

43.2

Major PPT

77.4

0.62

0.9

70.4

36.3

Minor 5ss

35.7

-1.6

48.8

Minor BPS

38.9

-0.7

2.3

56.93

45.6

Associated Gene:

Gene:

DENND6B

Ensembl Gene ID:

ENSAPLG00000009711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010142

328733 - 348761

20029