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Intron Name: Anas_platyrhynchos_platyrhynchos_1_33888161_33940398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33888161 - 33940398

Intron Length:

52238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGACTAAT

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

AAATACTTATTT

Flanking Amino Acid:

IYLFPSWGNIWMNKRYLQKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

75.8

35.2

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

37.6

-1.4

2.8

47.6

42.5

Minor BPS

54.3

0.21

1.8

69.87

40.7

Associated Gene:

Gene:

TAFA2

Ensembl Gene ID:

ENSAPLG00000002705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044557

33855873 - 33941094

85222