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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3400716_3438189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3400716 - 3438189

Intron Length:

37474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAAAGTT

5'SS Class:

major

3'SS Sequence:

TTCCCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAA

U12 Branch Point Sequence:

ACAACCTGAATT

Flanking Amino Acid:

AIKLCHQIERVEYILRQRGF

Intron Amino Acid Position:

883

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.1

38.2

Major BPS

0.17

0.9

30.8

Major PPT

77.3

0.61

0.9

72.5

32.2

Minor 5ss

-1.5

3.7

52.2

45.6

Minor BPS

58.8

0.36

1.5

69.23

41.4

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028565

3400206 - 3531273

131068