Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_34106151_34106270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34106151 - 34106270

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGACTG

5'SS Class:

major

3'SS Sequence:

TCAATTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

CCCTCCTCAATT

Flanking Amino Acid:

PNGIHEEGSPSEMETDEQDD

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.2

41.7

Major BPS

73.1

0.58

73.8

32.3

Major PPT

0.58

72.8

41.9

Minor 5ss

37.3

-1.4

3.2

48.8

41.2

Minor BPS

62.4

0.47

1.6

71.5

Associated Gene:

Gene:

USP15

Ensembl Gene ID:

ENSAPLG00000001801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041372

34056794 - 34110967

54174

ENSAPLT00000029192

34061811 - 34110967

49157

ENSAPLT00000017691

34056794 - 34110967

54174

ENSAPLT00000002389

34056794 - 34110967

54174