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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34150747_34151333_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34150747 - 34151333

Intron Length:
587

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGTTGGG

5'SS Class:
major

3'SS Sequence:
ATTTCTTTTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATGTTAT

U12 Branch Point Sequence:
TTTCTTTTTAAG

Flanking Amino Acid:
CAKDAYMLFQDLCQLVNADA

Intron Amino Acid Position:
222

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.1
0.54
1.1
59.9
45.1

Major BPS
72.5
0.56
1.2
63.4
44

Major PPT
79.2
0.66
1
83.6
31

Minor 5ss
30.8
-2.2
3.4
40.6
45.6

Minor BPS
49.4
-0.1
1.8
61.38
40.3

Associated Gene:

Gene:
MON2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34128742 - 34218383
89642

34128742 - 34205095
76354

34128742 - 34197416
68675