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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34168296_34170795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34168296 - 34170795

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TGTTTTTTTAAG

Flanking Amino Acid:

GVMGAIRSDQGESLIRTAFQ

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

81.4

0.71

86.9

31.1

Minor 5ss

-1.8

3.3

40.9

45.4

Minor BPS

50.4

-0.1

1.8

60.53

41.2

Associated Gene:

Gene:

MON2

Ensembl Gene ID:

ENSAPLG00000015190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022454

34128742 - 34218383

89642

ENSAPLT00000022005

34128742 - 34205095

76354

ENSAPLT00000015905

34128742 - 34197416

68675