Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_34244948_34247708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34244948 - 34247708

Intron Length:

2761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGCT

5'SS Class:

major

3'SS Sequence:

CTCCAATGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

TCAAACGTAACA

Flanking Amino Acid:

LPNCDPDDPHRERCLHPAMQ

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

1.1

72.6

36.5

Major BPS

63.3

0.33

1.2

39.8

Major PPT

63.1

0.3

56.5

37.5

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

47.8

-0.1

2.2

62.03

43.6

Associated Gene:

Gene:

PPM1H

Ensembl Gene ID:

ENSAPLG00000014950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015609

34244725 - 34374400

129676