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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3438295_3440335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3438295 - 3440335

Intron Length:

2041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAGTC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

AAACCATTATCA

Flanking Amino Acid:

APLAKIFQEQDIDGQALLLL

Intron Amino Acid Position:

848

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

66.6

37.7

Major BPS

78.3

0.7

32.1

Major PPT

87.9

0.85

0.6

81.4

30.6

Minor 5ss

32.9

-1.9

3.8

49.4

47.1

Minor BPS

48.6

-0.1

1.8

59.38

39.3

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338