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Intron Name: Anas_platyrhynchos_platyrhynchos_1_343834_348617_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
343834 - 348617

Intron Length:
4784

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGCCGTGG

5'SS Class:
major

3'SS Sequence:
TCCCTTTTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTCTCAT

U12 Branch Point Sequence:
CGTGCCTGACTT

Flanking Amino Acid:
FDLELGQAMELVYPYDFRLT

Intron Amino Acid Position:
49

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.2
0.24
1.2
48.5
44.5

Major BPS
82.6
0.81
0.9
83.3
27.7

Major PPT
87.5
0.84
0.7
83.2
25.1

Minor 5ss
35.2
-1.7
3.4
46.9
48.5

Minor BPS
48.3
-0
1.9
65.07
45.7

Associated Gene:

Gene:
DENND6B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

328733 - 348761
20029