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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3440465_3440696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3440465 - 3440696

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATGA

Flanking Amino Acid:

EAEKCTQVKEEIKHEEEEKL

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

84.8

0.78

0.7

84.8

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

64.4

0.45

1.9

78.76

38.3

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338

ENSAPLT00000036909

3432656 - 3531273

98618