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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3443595_3451165_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3443595 - 3451165

Intron Length:

7571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

AACTCTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TCATCTTGAACT

Flanking Amino Acid:

WNFQEETLKAKYRGKTYRAT

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

74.6

0.61

65.6

41.4

Major PPT

74.4

0.55

0.9

66.1

39.9

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

70.8

0.73

1.4

81.66

39.8

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013226

3418936 - 3531273

112338

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068