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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3451276_3458046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3451276 - 3458046

Intron Length:

6771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TATGTCTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATGTCTCAATA

Flanking Amino Acid:

PGKCVLVLKEVLSMVINAAY

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.9

0.4

0.9

63.4

Minor 5ss

41.4

-1

3.3

58.6

46.2

Minor BPS

58.5

0.26

1.6

68.21

38.6

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338

ENSAPLT00000036909

3432656 - 3531273

98618