Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_34522207_34530264_R

Intron Information:

Intron Rank:

151636

Intron Class:

major

Intron Phase:

Intron Coordinates:

34522207 - 34530264

Intron Length:

8058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCCTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

ATATCCTGATAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

42.3

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

0.74

0.9

80.7

36.3

Minor 5ss

48.5

-0.1

2.8

67.7

43.5

Minor BPS

51.5

0.04

1.8

65.51

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028466

34522009 - 34530366

8358