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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3458187_3459338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3458187 - 3459338

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TGCACATCAACG

Flanking Amino Acid:

LCPVPQPDTTGTINGRYCCP

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

0.9

0.6

22.5

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

47.9

-0.3

1.9

54.87

45.4

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338