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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3467724_3469364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3467724 - 3469364

Intron Length:

1641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCTCT

5'SS Class:

major

3'SS Sequence:

TTGACTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

TGGTCCTTGACT

Flanking Amino Acid:

EAAPHQCFRNTSFSRGFTKN

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

72.3

40.1

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

80.6

0.69

0.9

77.5

36.7

Minor 5ss

47.9

-0.2

2.8

65.3

39.2

Minor BPS

81.5

1.07

1.1

88.2

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013226

3418936 - 3531273

112338

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068