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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34709096_34711206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34709096 - 34711206

Intron Length:

2111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATTTCTATATGT

Flanking Amino Acid:

TRSTKDHQQYKKDQNLLSPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

29.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.59

0.8

73.2

31.7

Minor 5ss

33.8

-1.8

3.5

47.5

42.5

Minor BPS

0.01

2.1

41.9

Associated Gene:

Gene:

SRGAP1

Ensembl Gene ID:

ENSAPLG00000008005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025345

34632585 - 34784998

152414

ENSAPLT00000023232

34708953 - 34784998

76046

ENSAPLT00000008430

34656386 - 34784695

128310