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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34742625_34743415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34742625 - 34743415

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

GATTCTTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GATTCTTTATTA

Flanking Amino Acid:

FEFQSHMGDEVCQVTAQQPV

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

79.7

35.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

71.7

0.49

0.9

71.1

39.3

Minor 5ss

40.8

-1

2.6

51.4

45.1

Minor BPS

62.7

0.39

1.5

69.1

37.5

Associated Gene:

Gene:

SRGAP1

Ensembl Gene ID:

ENSAPLG00000008005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025345

34632585 - 34784998

152414

ENSAPLT00000023232

34708953 - 34784998

76046

ENSAPLT00000008430

34656386 - 34784695

128310