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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3474639_3475307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3474639 - 3475307

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

AACATCTGATTT

Flanking Amino Acid:

FHICPASVTKVFNNHYLQVT

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

82.1

0.72

0.6

81.8

23.1

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

45.4

-0.2

1.6

56.74

39.9

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068

ENSAPLT00000013226

3418936 - 3531273

112338