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Intron Name: Anas_platyrhynchos_platyrhynchos_1_3475410_3486258_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3475410 - 3486258

Intron Length:

10849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGTTCTTTCCCC

Flanking Amino Acid:

NFPLPMEVFKDHADLRSHFF

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

80.7

0.69

0.8

73.1

37.3

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

-0.4

3.6

70.5

41.3

Associated Gene:

Gene:

SFMBT2

Ensembl Gene ID:

ENSAPLG00000012668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013226

3418936 - 3531273

112338

ENSAPLT00000036909

3432656 - 3531273

98618

ENSAPLT00000028565

3400206 - 3531273

131068