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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34781301_34781899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34781301 - 34781899

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGCAGG

5'SS Class:

major

3'SS Sequence:

GTCTTCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

CTTACCTCACCA

Flanking Amino Acid:

VPHQYIVVQDMDDTFSDTLS

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

65.7

45.7

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

78.5

0.64

0.9

76.7

37.5

Minor 5ss

41.2

-1

2.9

53.4

43.8

Minor BPS

53.5

0.11

1.9

68.34

43.9

Associated Gene:

Gene:

SRGAP1

Ensembl Gene ID:

ENSAPLG00000008005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023232

34708953 - 34784998

76046

ENSAPLT00000008430

34656386 - 34784695

128310

ENSAPLT00000025345

34632585 - 34784998

152414