Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_34790291_34793566_R

Intron Information:

Intron Rank:

142847

Intron Class:

major

Intron Phase:

Intron Coordinates:

34790291 - 34793566

Intron Length:

3276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGG

5'SS Class:

major

3'SS Sequence:

TGGACTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGGAC

U12 Branch Point Sequence:

TTCTTCTGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

67.1

44.6

Major BPS

49.6

-0

1.4

44.3

Major PPT

69.3

0.43

58.9

42.9

Minor 5ss

37.6

-1.4

3.2

49.7

46.6

Minor BPS

68.1

0.65

1.5

83.37

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035888

34789845 - 34794860

5016