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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34831333_34832632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

34831333 - 34832632

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCTCTCGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.8

0.72

0.8

75.6

32.9

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

69.2

0.47

1.3

71.2

36.4

Associated Gene:

Gene:

C12orf66

Ensembl Gene ID:

ENSAPLG00000007925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031047

34822320 - 34833532

11213