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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34842420_34843016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34842420 - 34843016

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

ACTGATTTATTC

Flanking Amino Acid:

VDRDVVHTSEEARRNTLLKD

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.7

30.2

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

64.4

0.33

60.2

40.5

Minor 5ss

31.5

-2.1

48.7

47.5

Minor BPS

45.8

-0.3

1.8

52.77

39.6

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025569

34836522 - 34857356

20835

ENSAPLT00000024288

34836599 - 34860642

24044

ENSAPLT00000020507

34836522 - 34857775

21254

ENSAPLT00000041582

34837060 - 34857775

20716

ENSAPLT00000008445

34836522 - 34860846

24325

ENSAPLT00000032105

34836522 - 34857775

21254