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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34843202_34843583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34843202 - 34843583

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTACTTTTAAAT

Flanking Amino Acid:

WIDLSLIANERFINMLLGHM

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.9

0.67

0.9

82.5

26.7

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

60.3

0.4

1.4

72.2

38.1

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020507

34836522 - 34857775

21254

ENSAPLT00000041582

34837060 - 34857775

20716

ENSAPLT00000008445

34836522 - 34860846

24325

ENSAPLT00000032105

34836522 - 34857775

21254

ENSAPLT00000025569

34836522 - 34857356

20835

ENSAPLT00000024288

34836599 - 34860642

24044

ENSAPLT00000047804

34836599 - 34860642

24044