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Intron Name: Anas_platyrhynchos_platyrhynchos_1_34843753_34845073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34843753 - 34845073

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTATTTTTAATC

Flanking Amino Acid:

QSAGLFSIDQEDDVDFLARF

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

77.1

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.4

0.95

0.6

87.6

22.8

Minor 5ss

37.5

-1.4

2.4

42.6

44.3

Minor BPS

0.61

1.1

71.24

Associated Gene:

Gene:

XPOT

Ensembl Gene ID:

ENSAPLG00000008073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024288

34836599 - 34860642

24044

ENSAPLT00000047804

34836599 - 34860642

24044

ENSAPLT00000020507

34836522 - 34857775

21254

ENSAPLT00000041582

34837060 - 34857775

20716

ENSAPLT00000008445

34836522 - 34860846

24325

ENSAPLT00000032105

34836522 - 34857775

21254

ENSAPLT00000025569

34836522 - 34857356

20835